Mid-term exam syllabus, Biochem-506: Ch-3 and Ch-4 of Lehninger.
Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc;
…. PLUS…. First 200 MCQs from chapters 3 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.
Final exam syllabus, Biochem-506: Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications.
…. PLUS…. All MCQs from chapters 3 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.
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Assignments and presentations:
- The weightage of the assignment and presentation will be decided later.
- Start preparing your presentations and assignments.
- The presentations will also be started right after the mid-term exam.
- PPT file should not contain any designing/colours other than figures and diagrams.
- Slides should be in 16X9 ratio.
- Fonts of all header should be same and of all other text should be same.
- For detailed guidelines about the presentation of research article, visit: https://www.lifesciencesorg.combiochem-720/
- Download the template ppt file to make your presentation. The link is here (copy this link and paste in a new tab).
- Strictly follow the ppt format and it is better if you write and paste your material in the same ppt file.
K. General Question to be asked during the presentation
- 1) Pathway or importance of gene/technology/discovery
- 2) Rationale
- 3) Conclusion of the full article
- 4) Conclusion of every figure
- 5) New findings presented in the article
- 6) Applications of the findings
- 7) Future prospective
- 8) Applications of the work
- 9) Principle of every technique used in the research article
Moreover, provide me a printed summary of your article containing the above headings given under ‘K’.
L. During Presentations, for EVERY FIGURE and graph, we may ask:
1. The Principle of the experiment.
2. The Reason for doing the experiment/s.
3. The Physiological importance of the figure.
4. The Conclusions of the figure
5. Prepare well objectively and subjectively
Biochem-506: Start preparing your presentations and assignments….. Assignment submission is the first class of next month, October 2022. The presentations will also be started after mid-term exam.
NO EXCUSE WILL BE ACCEPTED
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MCQs will be taken from the text-book and from chapter 3 of the book ” MCQs in Biochemistry”.
Link to download this book is given below:
https://b-ok.cc/dl/1055171/2292c5
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Meeting ID: 316 824 288 013
Passcode: WNyjeA
Microsoft teams will be used whenever online classes will be held. You must make your first name as your registration number.
2017-ag-9382 Haidar Iftikhar
2017-ag-10077 Ahmad Faraz
Link to download the book ( MCQs in Biochemistry) is here.
BIOCHEM-506 BIOCHEMISTRY OF PROTEINS 3(3-0)
Theory
Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc; Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications.
Suggested Readings:
- Stryer, L. 2012. Biochemistry, 7th Edition, W. H. Freeman and Co. Lab Manual in Biochemistry, Immunology and Biotechnology, Arti Nigram, Archana Ayyagari. Tata McGraw-Hill Publishing Company Limited, New Delhi.
- Ferrier, D. R. 2017. Biochemistry: Lippincott’s Illustrated Reviews. 7th Lippincott Williams and Wilkins. U.S.A.
- Nelson, D.L and M.M. Cox. 2017. Lehninger Principles of Biochemistry. 7th ed. WH Freeman & Company, New York, NY, USA.
- Rodwell, V and D. Bender. 2015. Harpers Illustrated Biochemistry. 30th McGraw Hill, New York, USA.
- Voet, D., Voet, J.G and C.W. Pratt. 2013. Fundamentals of Biochemistry, Life at the Molecular Level. 4th John Wiley & Sons. Inc. New York, NY, USA.
BS Biochemistry, Biovhem-506A, Winter 2025-26, Dr. Muhammad Ali | ||||
Sr. | Ag No. | Student’s Name | Group | Research article for presentation and 1 page summary |
1 | 2023-ag-8497 | AYEZA ABBAS | G1 | Training and quiz of some hands-on training workshop |
2 | 2023-ag-8498 | MISBAH IMTIAZ | ||
3 | 2023-ag-8499 | MAH JABEEN | ||
4 | 2023-ag-8500 | LAIBA MOHSIN | ||
5 | 2023-ag-8501 | LAIBA IKRAM | ||
6 | 2023-ag-8502 | SEHRISH AKBAR | G2 | Training and quiz of some hands-on training workshop |
7 | 2023-ag-8503 | INFAL NASIR | ||
8 | 2023-ag-8504 | ASMA ALTAF | ||
9 | 2023-ag-8505 | IMAN NASIR | ||
10 | 2023-ag-8506 | ANEEZA FATIMA | ||
11 | 2023-ag-8507 | NOOR FATIMA IDREES | G3 | Training and quiz of some hands-on training workshop |
12 | 2023-ag-8508 | LAIBA ALI | ||
13 | 2023-ag-8509 | EMAN KANWAL | ||
14 | 2023-ag-8510 | AREEBA MALIK | ||
15 | 2023-ag-8511 | TANZEELA AMEEN | ||
16 | 2023-ag-8512 | NOOR FATIMA | G4 | Training and quiz of some hands-on training workshop |
17 | 2023-ag-8513 | HALEEMA AMIR | ||
18 | 2023-ag-8514 | ZUHAA IMRAN | ||
19 | 2023-ag-8515 | MAIDA MANZOOR | ||
20 | 2023-ag-8516 | FARWA KAMRAN | ||
21 | 2023-ag-8517 | TARBEEA KASAM | G5 | Training and quiz of some hands-on training workshop |
22 | 2023-ag-8518 | VANEEZA SALEEM | ||
23 | 2023-ag-8520 | ROBINA SAJJAD | ||
24 | 2023-ag-8521 | KIRAN IRSHAD | ||
25 | 2023-ag-8522 | AARFA | ||
26 | 2023-ag-8523 | HINA FATIMA | G6 | Training and quiz of some hands-on training workshop |
27 | 2023-ag-8525 | TAHREEM ASGHAR | ||
28 | 2023-ag-8526 | AMNA AHMAD | ||
29 | 2023-ag-8527 | ARFA RIAZ | ||
30 | 2023-ag-8528 | AENA ABUBAKAR | ||
31 | 2023-ag-8529 | AMNA AMEEN | G7 | Training and quiz of some hands-on training workshop |
32 | 2023-ag-8530 | MOMNA SHAHZAD | ||
33 | 2023-ag-8532 | SEHAR ANDLEEB ASLAM | ||
34 | 2023-ag-8534 | AQSA ASHIQ | ||
35 | 2023-ag-8536 | HAMNA IDREES | ||
36 | 2023-ag-8537 | MISBAH AZHAR | G8 | Training and quiz of some hands-on training workshop |
37 | 2023-ag-8538 | AFIA NISAR | ||
38 | 2023-ag-8539 | FATIMA IHSAN | ||
39 | 2023-ag-8541 | SEHRISH BATOOL | ||
40 | 2023-ag-8542 | MEMOONA BIBI | ||
41 | 2023-ag-8543 | DOSHAL LIAQAT | G9 | Training and quiz of some hands-on training workshop |
42 | 2023-ag-8544 | TRABI TARA | ||
43 | 2023-ag-8545 | TAYYABA SAGHEER | ||
44 | 2023-ag-8546 | LAIBA SAEED | ||
45 | 2023-ag-8547 | RIMSHA | ||
46 | 2023-ag-8548 | PAKIZA ASHFAQ | G10 | Training and quiz of some hands-on training workshop |
47 | 2023-ag-8564 | UME HABIBA | ||
48 | 2023-ag-8565 | MAHNOOR ZAKIR | ||
49 | 2023-ag-8567 | FAIQA | ||
50 |
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