Biochem-306 (list of practical) 4(3-1)

  1. Preparation of solutions: Preparation of percentage, molar and normal solutions; Preparation of buffer; (Experiment 2.1, 2.3, 2.4, 2.7-2.9, 2.15, 2.18, 2.19)

  2. Carbohydrate Analysis: Group identification test, Identification of Mono, di and polysaccharides, Identification of reducing sugars, ketose sugar and their confirmation by phenyl hydrazine test, Identification scheme for carbohydrates; (experiments 3.1-3.9)

  3. Quantitative estimation of glucose in blood sample by glucose oxidase method; (experiment 3.12)

  4. Estimation of amino acids by spectrophotometery, Biuret test and ninhydrin test; (4.4, 4.10, 4.11, 4.13)

  5. Precipitation tests of proteins: precipitation of casein at isoelectric point, salt saturation tests, (5.6, 7.11)

  6. serum protein fractionation by ammonium sulfate precipitation; (5.6)

  7. Separation of the colour pigments of berseen/alfalfa by paper chromatography; (4.9)

  8. Identification of lipids. (6.1 to 6.7, 6.14 to 6.15)

Mid-term syllabus of Biochem-306: Introduction to biochemistry; pH & its importance; Buffer: Henderson-Hasselbalch equation; Carbohydrates: Introduction, classification, glycoside linkages & glycosides isomers, optical activity & rotations, chemical properties of monosaccharide, structure and functions of important monosaccharide, Homopolysaccharide, Heteropolysaccharides; Proteins: Introduction, classification; Structure and classification of amino acids, amphoteric properties of amino acids, concept of Isoelectric pH, peptide linkages; Primary, secondary, tertiary and quaternary structure of proteins; 

…. PLUS…. 150 MCQs fromeach of  chapters 2 (150/302) and chapter -3 (150/729) of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.

  Final exam Biochem-306: Enzymes: General characteristics and classification, enzyme kinetics; Lipids: Introduction, structure and classification of fatty acids, nomenclature of fatty acid, physical properties of fatty acids and triglycerides, chemical properties of fatty acid  and triglycerides; Sterols and Cholesterol; Prostaglandin and their physical role; Carbohydrate metabolism: Glycolysis, regulation, energy production, Kreb’s Cycle, regulation, energy production, Electron transport chain, pentose phosphate shunt, gluconeogenesis; Protein metabolism: Degradation of proteins and amino acids; Urea cycle and its importance, urea toxicity, regulation of urea cycle; Bioenergetics of protein metabolism; Lipid metabolism: Beta oxidation of even and odd chain fatty acids, biosynthesis of fatty acids, biosynthesis of triglycerides, biosynthesis of cholesterol, biosynthesis of Ketone bodies; DNA metabolism: Biosynthesis and degradation of nucleic acids; Comparative features among animal species of particular relevance, comparative metabolism of mono-gastric and poly-gastric animals.

…. PLUS…. 150 MCQs from each of chapters 2 (150/302)-3 (150/729),  6  (150/586), 9 (150/621) of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam. The mid-term syllabus will be included in the final exam.

 Presentations of Biochem-306: 

  1. The weightage of the assignment and presentation will be decided later. 
  2. Start preparing your presentations……
  3. The presentations will also be started right after the mid-term exam.
  4. PPT file should not contain any designing/colours other than figures and diagrams.
  5. Slides should be in 16X9 ratio.
  6. Fonts of all header should be same and of all other text should be same. 
  7. For detailed guidelines about the presentation of research article, visit: https://www.lifesciencesorg.combiochem-720/
  8. Download the template ppt file to make your presentation. The link is here (copy this link and paste in a new tab).

K. General Question to be asked during presentation

  1. Pathway or importance of gene/technology/discovery
  2. Rationale
  3. Conclusion of the full article
  4. Conclusion of every figure
  5. New findings presented in the article
  6. Applications of the findings
  7. Future prospective
  8. Applications of the work
  9. Principle of every technique used in the research article

Moreover, provide me a printed summary of your article containing the above headings given under ‘K’.

L. During Presentations, for EVERY FIGURE and graph, we may ask:

1. The Principle of the experiment.
2. The Reason for doing the experiment.
3. The Physiological importance of the figure.
4. The Conclusions of the figure
5. Prepare well objectively and subjectively

 The presentations will also be started after mid-term exam.

NO EXCUSE WILL BE ACCEPTED

__________________________________________________________________________________

Microsoft Teams meeting
Join on your computer, mobile app or room device

Click here to join the meeting

Meeting ID: 316 824 288 013
Passcode: WNyjeA

 __________________________________________________________________________________
 

Microsoft teams will be used whenever online classes will be held. You must make your MS teams ID’ s first name as your registration number.

2017-ag-9382 Haidar Iftikhar

2017-ag-10077 Ahmad Faraz 

 

Link to download the book ( MCQs in Biochemistry) is here.


  1. BIOCHEM-306                  ELEMENTARY BIOCHEMISTRY                  4(3 -1)

 Course Learning Outcomes

By the end of this course students will be able to;

  1. Understand basic knowledge about biomolecules carbohydrates, proteins, lipids and nucleic acids
  2. Learn anabolic and catabolic pathways of carbohydrate, lipid, protein and nucleic acids
  3. Explain different biochemical assays for the quantitative and qualitative estimation of biomolecules

 Theory

Introduction to biochemistry; pH & its importance; Buffer: Henderson-Hasselbalch equation; Carbohydrates: Introduction, classification, glycoside linkages & glycosides isomers, optical activity & rotations, chemical properties of monosaccharide, structure and functions of important monosaccharide, Homopolysaccharide, Heteropolysaccharides; Proteins: Introduction, classification; Structure and classification of amino acids, amphoteric properties of amino acids, concept of Isoelectric pH, peptide linkages; Primary, secondary, tertiary and quaternary structure of proteins; Enzymes: General characteristics and classification, enzyme kinetics; Lipids: Introduction, structure and classification of fatty acids, nomenclature of fatty acid, physical properties of fatty acids and triglycerides, chemical properties of fatty acid  and triglycerides; Sterols and Cholesterol; Prostaglandin and their physical role; Carbohydrate metabolism: Glycolysis, regulation, energy production, Kreb’s Cycle, regulation, energy production, Electron transport chain, pentose phosphate shunt, gluconeogenesis; Protein metabolism: Degradation of proteins and amino acids; Urea cycle and its importance, urea toxicity, regulation of urea cycle; Bioenergetics of protein metabolism; Lipid metabolism: Beta oxidation of even and odd chain fatty acids, biosynthesis of fatty acids, biosynthesis of triglycerides, biosynthesis of cholesterol, biosynthesis of Ketone bodies; DNA metabolism: Biosynthesis and degradation of nucleic acids; Comparative features among animal species of particular relevance, comparative metabolism of mono-gastric and poly-gastric animals.

 

Practical

 

Preparation of solutions: Preparation of percentage, molar and normal solutions; Preparation of buffer; Carbohydrate Analysis: Group identification test, Identification of Mono, di and polysaccharides, Identification of reducing sugars, ketose sugar and their confirmation by phenyl hydrazine test, Identification scheme for carbohydrates; Quantitative estimation of glucose in blood sample by glucose oxidase method; Estimation of amino acids by spectrophotometery, Biuret test and ninhydrin test; Precipitation tests of proteins: precipitation of casein at isoelectric point, salt saturation tests, serum protein fractionation by ammonium sulfate precipitation; Separation of the colour pigments of berseen/alfalfa by paper chromatography; Identification of lipids.

 

Suggested Readings

  1. Berg, J.M, L. J. Tymoczko, G.J. Gatto and L. Stryer. 2019. Biochemistry. 9th Ed. W.H. Freeman and Co., New York, USA
  2. Boyer, R. 2012. Modern Experimental Biochemistry. 4th Ed. (LPE). Pearson Education, New Delhi, India.
  3. Murray, R., D. Bender, K.M. Botham, P.I. Kennelly, V. Rodwell and P.A. Weil. 2012. Harper’s Issustrated Biochemistry. 29th Ed. The McGraw-Hill Companies Inc. New York, USA.
  4.  Nelson, D.L and M.M. Cox. 2021. Lehninger Principles of Biochemistry. 8th Ed. WH Freeman & Company, New York, USA.
  5. Nigram, A. and A. Ayyagari. 2007. Lab Manual in Biochemistry, Immunology and Biotechnology. Tata McGraw-Hill Publishing Company Limited, New Dehli, India.
  6. Ali, M. et al., Experimental Biochemistry and Biotechnology (Series I), 2023, 3rd  edition, ISBN: 978-969-7502-04-1.
  7. Ali, M. et al., Experimental Biochemistry and Biotechnology (Series II), 2023. 2nd edition, ISBN: 978-969-7502-05-8.
  8. Ali, M. et al., Experimental Biochemistry and Biotechnology (Series III), 2024, 1st edition, ISBN: 978-969-7502-06-5.
Biochem-306, BS Micro, E-Winter 2023-24, Dr. Muhammad Ali
Sr.Ag No.Student’s NameGroupResearch article for presentation and 1 page summary
1NOOR FATIMAMUHAMMAD AMING1A patch of positively charged residues regulates the efficacy of clinical DR5 antibodies in solid tumors
2MARYAM NAEEMMUHAMMAD NAEEM JAVED
3MUHAMMAD IBRAHIM MUHAMMAD NADEEM
4MARYAM LARAIBASIM RIAZ
5MUHAMMAD AHMED HABIBMUHAMMAD SHAHID HABIB
6ANAM TARIQMUHAMMAD TARIQG2Preclinical evaluation of a novel antibody-drug conjugate targeting DR5 for lymphoblastic leukemia therapy
7MISHAALKAMRAN
8ANAS ROHAILIKHLAQ AHMAD
9AMINA SALEEMMUHAMMAD SALEEM
10FATIMA NOOR UL AINALTAF HUSSAIN
11M. USMAN ARSHADMUHAMMAD ARSHAD G3A highly stable human single-domain antibody-drug conjugate exhibits superior penetration and treatment of solid tumors
12RUBAB HUSAIN AWANSHAFQUAT HUSSAIN AWAN
13DUR-E-MAKNOONMUHAMMAD SHAHZAD
14FAIZAAN AMJADAMJAD HUSSAIN
15AHMAD TALAL SHAHIDSHAHID HUSSAIN
16AMEER HAMZA BAIGABDUL MAJEEDG4Eradication of Triple-Negative Breast Cancer Cells by Targeting Glycosylated PD-L1
17ATTIA AMTUL KARIM LUBNAWAHEED AHMAD
18TANIA MASOODPERVAIZ MASOOD
19MUNTAHA WAQASCH. WAQAS ZUBAIR
20SAMEEN IRFANIRFAN AKBAR CH.
21FATIMA IMRANIMRAN ZAFARG5Mesoporous Silica Nanoparticles as Drug Delivery Systems for Targeted Inhibition of Notch Signaling in Cancer
22MISBAH UR REHMANABDUL REHMAN
23AROOJ FATIMAMUHAMMAD FARHAT ASIM
24FATIMA IMTIAZIMTIAZ SAFDAR CHEEMA
25MAHNOOR MURTAZAMUHAMMAD MURTAZA
26SANA RIAZ MUHAMMAD RIAZ G6L-Arginine Modulates T Cell Metabolism and Enhances Survival and Anti-tumor Activity
27WAJIHA ZAHIDABDUL ZAHID
28SAMAIKA NOORMUHAMMAD SHAFIQUE 
29FATIMA BILALBILAL ILLYAS
30MARYAM LIAQUAT ALILIAQUAT ALI
31SAHAR REHMANREHMAN SALEEMG7BMP4 Upregulation Is Associated with Acquired Drug Resistance and Fatty Acid Metabolism in EGFR-Mutant Non-Small-Cell Lung Cancer Cells
32ABDUL RAUFKHADIM HUSSAIN
33MUHAMMAD RIZWAN SHAHIDMUHAMMAD SHAHID TAJ
34ALISHBA KAMALKAMAL AKBAR
35NIMRA AZEEMMUHAMMAD AZEEM
36ASIM AHMAD SALEEMMUHAMMAD SALEEMG8The topoisomerase inhibitor CPT-11 prevents the growth and metastasis of lung cancer cells in nude mice by inhibiting EGFR/ MAPK signaling pathway
37HAFIZA SIDRA BUSHRAMEHMOOD AHMAD 
38ABAID UL REHMAN ARIFZULFIQAR ALI
39WANIAM.IMRAN
40IZZASHAHZAD ISHAQ
41MUHAMMAD BIN MANSHADMANSHAD AHMADG9Identification of actionable targets for breast cancer intervention using a diversity outbred mouse model
42Bilal hasan chema 
43Abaid 
44Ali haider 
45Wajiha maqsood 
46Tayyaba sharif G10ZNF451 favors triple-negative breast cancer progression by enhancing SLUG-mediated CCL5 transcriptional expression
47 Sawaira Arshad 
48 Rimsha Ishtiaq 
49 Izza 
50 Saika noreen 
51Wajeeha Amjad 
52Sehar Bano 
53  
54  
55  
MMGL
Life Sciences by Dr. Muhammad Ali
This is template... Try to write, whatever headings are possible for a practical.

Add your first comment to this post

Comments are closed.